BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019H12SP1|AL427548
(108 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1674 118 2e-27
>3x_Contig1674
Length = 12281
Score = 118 bits (59), Expect = 2e-27
Identities = 94/107 (87%)
Strand = Plus / Minus
Query: 1 ccccaaggggaacgatagamtcccagtgaaaaccatggactgtatcgcaactgttatcaa 60
|||||| || ||||||||| || ||||||||||||||||||||||||||||| |||||||
Sbjct: 9996 ccccaatggtaacgatagaatctcagtgaaaaccatggactgtatcgcaacttttatcaa 9937
Query: 61 taatgagacgtcccccatggaaccacccgccycgaatcccgtgccag 107
||||||||||| || ||||||| || |||| ||||| | |||||||
Sbjct: 9936 taatgagacgttcctcatggaatcatccgcttcgaattctgtgccag 9890
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 355
Number of Sequences: 1807
Number of extensions: 355
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 108
length of database: 10,358,551
effective HSP length: 15
effective length of query: 93
effective length of database: 10,331,446
effective search space: 960824478
effective search space used: 960824478
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 48 (96.8 bits)